use name of grid in output
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parent
6fe4e1460f
commit
86f75905d9
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@ -65,13 +65,15 @@ impl Drop for OutputThread {
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}
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#[derive(Debug, Clone)]
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pub struct File(hdf5::File);
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pub struct File(hdf5::File, Vec<String>);
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impl File {
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pub fn create<P: AsRef<std::path::Path>>(
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path: P,
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grids: &[sbp::grid::Grid],
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names: Vec<String>,
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) -> Result<Self, Box<dyn std::error::Error>> {
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assert_eq!(grids.len(), names.len());
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let file = hdf5::File::create(path.as_ref())?;
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let _tds = file
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.new_dataset::<u64>()
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@ -79,8 +81,8 @@ impl File {
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.chunk((1,))
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.create("t", (0,))?;
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for (i, grid) in grids.iter().enumerate() {
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let g = file.create_group(&i.to_string())?;
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for (name, grid) in names.iter().zip(grids.iter()) {
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let g = file.create_group(name)?;
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g.link_soft("/t", "t").unwrap();
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let add_dim = |name| {
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@ -108,7 +110,7 @@ impl File {
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add_var("e")?;
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}
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Ok(Self(file))
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Ok(Self(file, names))
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}
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pub fn add_timestep(
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@ -122,8 +124,8 @@ impl File {
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tds.resize((tpos + 1,))?;
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tds.write_slice(&[t], ndarray::s![tpos..tpos + 1])?;
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for (i, fnow) in fields.iter().enumerate() {
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let g = file.group(&i.to_string())?;
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for (groupname, fnow) in self.1.iter().zip(fields.iter()) {
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let g = file.group(groupname)?;
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let (tpos, ny, nx) = {
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let ds = g.dataset("rho")?;
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let shape = ds.shape();
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@ -156,7 +156,7 @@ fn main() {
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let json = json::parse(&filecontents).unwrap();
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let vortexparams = json_to_vortex(json["vortex"].clone());
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let (_names, grids, bt, operators) = json_to_grids(json["grids"].clone(), vortexparams);
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let (names, grids, bt, operators) = json_to_grids(json["grids"].clone(), vortexparams);
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let integration_time: Float = json["integration_time"].as_number().unwrap().into();
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@ -197,7 +197,7 @@ fn main() {
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})
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};
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let output = File::create(&opt.output, sys.grids.as_slice()).unwrap();
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let output = File::create(&opt.output, sys.grids.as_slice(), names).unwrap();
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let mut output = OutputThread::new(output);
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let progressbar = progressbar(opt.no_progressbar, ntime);
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