SummationByParts/sbp/src/operators/algos.rs

593 lines
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Rust
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use super::*;
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use ndarray::s;
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use num_traits::Zero;
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pub(crate) mod constmatrix;
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pub(crate) use constmatrix::{flip_lr, flip_sign, flip_ud, ColVector, Matrix, RowVector};
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#[cfg(feature = "fast-float")]
mod fastfloat;
#[cfg(feature = "fast-float")]
use fastfloat::FastFloat;
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#[derive(Clone, Debug, PartialEq)]
pub(crate) struct DiagonalMatrix<const B: usize> {
pub start: [Float; B],
pub diag: Float,
pub end: [Float; B],
}
impl<const B: usize> DiagonalMatrix<B> {
pub const fn new(block: [Float; B]) -> Self {
let start = block;
let diag = 1.0;
let mut end = block;
let mut i = 0;
while i < B {
end[i] = block[B - 1 - i];
i += 1;
}
Self { start, diag, end }
}
}
#[derive(Clone, Debug, PartialEq)]
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pub(crate) struct BlockMatrix<T, const M: usize, const N: usize, const D: usize> {
pub start: Matrix<T, M, N>,
pub diag: RowVector<T, D>,
pub end: Matrix<T, M, N>,
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}
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impl<T, const M: usize, const N: usize, const D: usize> BlockMatrix<T, M, N, D> {
pub const fn new(start: Matrix<T, M, N>, diag: RowVector<T, D>, end: Matrix<T, M, N>) -> Self {
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Self { start, diag, end }
}
}
#[derive(PartialEq, Copy, Clone)]
pub(crate) enum OperatorType {
Normal,
H2,
// TODO: D2
}
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#[inline(always)]
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/// Works on all 1d vectors
pub(crate) fn diff_op_1d_fallback<const M: usize, const N: usize, const D: usize>(
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matrix: &BlockMatrix<Float, M, N, D>,
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optype: OperatorType,
prev: ArrayView1<Float>,
mut fut: ArrayViewMut1<Float>,
) {
assert_eq!(prev.shape(), fut.shape());
let nx = prev.shape()[0];
assert!(nx >= 2 * M);
assert!(nx >= N);
let dx = if optype == OperatorType::H2 {
1.0 / (nx - 2) as Float
} else {
1.0 / (nx - 1) as Float
};
let idx = 1.0 / dx;
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let (futstart, futmid, futend) =
fut.multi_slice_mut((s![..M], s![M..nx - 2 * M], s![nx - 2 * M..]));
for (bl, f) in matrix.start.iter_rows().zip(futstart) {
let diff = dotproduct(bl.iter(), prev.iter());
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*f = diff * idx;
}
// The window needs to be aligned to the diagonal elements,
// based on the block size
let window_elems_to_skip = M - ((D - 1) / 2);
for (window, f) in prev
.windows(D)
.into_iter()
.skip(window_elems_to_skip)
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.zip(futmid)
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{
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let diff = dotproduct(matrix.diag.row(0), window);
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*f = diff * idx;
}
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let prev = prev.slice(ndarray::s![nx - N..]);
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for (bl, f) in matrix.end.iter_rows().zip(futend) {
let diff = dotproduct(bl, prev);
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*f = diff * idx;
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}
}
#[inline(always)]
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/// diff op in 1d for slices
pub(crate) fn diff_op_1d_slice<const M: usize, const N: usize, const D: usize>(
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matrix: &BlockMatrix<Float, M, N, D>,
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optype: OperatorType,
prev: &[Float],
fut: &mut [Float],
) {
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#[cfg(feature = "fast-float")]
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let (matrix, prev, fut) = {
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use std::mem::transmute;
unsafe {
(
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transmute::<_, &BlockMatrix<FastFloat, M, N, D>>(matrix),
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transmute::<_, &[FastFloat]>(prev),
transmute::<_, &mut [FastFloat]>(fut),
)
}
};
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assert_eq!(prev.len(), fut.len());
let nx = prev.len();
assert!(nx >= 2 * M);
assert!(nx >= N);
let prev = &prev[..nx];
let fut = &mut fut[..nx];
let dx = if optype == OperatorType::H2 {
1.0 / (nx - 2) as Float
} else {
1.0 / (nx - 1) as Float
};
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let idx = 1.0 / dx;
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#[cfg(feature = "fast-float")]
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let idx = FastFloat::from(idx);
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// Help aliasing analysis
let (futb1, fut) = fut.split_at_mut(M);
let (fut, futb2) = fut.split_at_mut(nx - 2 * M);
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use std::convert::TryInto;
{
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let prev = ColVector::<_, N>::map_to_col(prev.array_windows::<N>().next().unwrap());
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let fut = ColVector::<_, M>::map_to_col_mut(futb1.try_into().unwrap());
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fut.matmul_into(&matrix.start, prev);
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*fut *= idx;
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}
// The window needs to be aligned to the diagonal elements,
// based on the block size
let window_elems_to_skip = M - ((D - 1) / 2);
for (window, f) in prev
.array_windows::<D>()
.skip(window_elems_to_skip)
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.zip(fut.array_chunks_mut::<1>())
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{
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let fut = ColVector::<_, 1>::map_to_col_mut(f);
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let prev = ColVector::<_, D>::map_to_col(window);
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fut.matmul_into(&matrix.diag, prev);
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*fut *= idx;
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}
{
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let prev = prev.array_windows::<N>().next_back().unwrap();
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let prev = ColVector::<_, N>::map_to_col(prev);
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let fut = ColVector::<_, M>::map_to_col_mut(futb2.try_into().unwrap());
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fut.matmul_into(&matrix.end, prev);
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*fut *= idx;
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}
}
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#[inline(always)]
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/// Will always work on 1d, delegated based on slicedness
pub(crate) fn diff_op_1d<const M: usize, const N: usize, const D: usize>(
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matrix: &BlockMatrix<Float, M, N, D>,
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optype: OperatorType,
prev: ArrayView1<Float>,
mut fut: ArrayViewMut1<Float>,
) {
assert_eq!(prev.shape(), fut.shape());
let nx = prev.shape()[0];
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assert!(nx >= 2 * M);
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if let Some((prev, fut)) = prev.as_slice().zip(fut.as_slice_mut()) {
diff_op_1d_slice(matrix, optype, prev, fut)
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} else {
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diff_op_1d_fallback(matrix, optype, prev, fut)
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}
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}
#[inline(always)]
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/// 2D diff fallback for when matrices are not slicable
pub(crate) fn diff_op_2d_fallback<const M: usize, const N: usize, const D: usize>(
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matrix: &BlockMatrix<Float, M, N, D>,
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optype: OperatorType,
prev: ArrayView2<Float>,
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fut: ArrayViewMut2<Float>,
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) {
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#[cfg(feature = "fast-float")]
let (matrix, prev, mut fut) = unsafe {
(
std::mem::transmute::<_, &BlockMatrix<FastFloat, M, N, D>>(matrix),
std::mem::transmute::<_, ArrayView2<FastFloat>>(prev),
std::mem::transmute::<_, ArrayViewMut2<FastFloat>>(fut),
)
};
#[cfg(not(feature = "fast-float"))]
let mut fut = fut;
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assert_eq!(prev.shape(), fut.shape());
let nx = prev.shape()[1];
let ny = prev.shape()[0];
assert!(nx >= 2 * M);
let dx = if optype == OperatorType::H2 {
1.0 / (nx - 2) as Float
} else {
1.0 / (nx - 1) as Float
};
let idx = 1.0 / dx;
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fut.fill(0.0.into());
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let (mut fut0, mut futmid, mut futn) = fut.multi_slice_mut((
ndarray::s![.., ..M],
ndarray::s![.., M..nx - M],
ndarray::s![.., nx - M..],
));
// First block
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for (bl, mut fut) in matrix
.start
.iter_rows()
.zip(fut0.axis_iter_mut(ndarray::Axis(1)))
{
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debug_assert_eq!(fut.len(), prev.shape()[0]);
for (&bl, prev) in bl.iter().zip(prev.axis_iter(ndarray::Axis(1))) {
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if bl.is_zero() {
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continue;
}
debug_assert_eq!(prev.len(), fut.len());
fut.scaled_add(idx * bl, &prev);
}
}
let window_elems_to_skip = M - ((D - 1) / 2);
// Diagonal entries
for (mut fut, id) in futmid
.axis_iter_mut(ndarray::Axis(1))
.zip(prev.windows((ny, D)).into_iter().skip(window_elems_to_skip))
{
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for (&d, id) in matrix.diag.iter().zip(id.axis_iter(ndarray::Axis(1))) {
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if d.is_zero() {
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continue;
}
fut.scaled_add(idx * d, &id)
}
}
// End block
let prev = prev.slice(ndarray::s!(.., nx - N..));
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for (bl, mut fut) in matrix
.end
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.iter_rows()
.zip(futn.axis_iter_mut(ndarray::Axis(1)))
{
for (&bl, prev) in bl.iter().zip(prev.axis_iter(ndarray::Axis(1))) {
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if bl.is_zero() {
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continue;
}
fut.scaled_add(idx * bl, &prev);
}
}
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}
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#[inline(always)]
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pub(crate) fn diff_op_2d_sliceable<const M: usize, const N: usize, const D: usize>(
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matrix: &BlockMatrix<Float, M, N, D>,
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optype: OperatorType,
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prev: ArrayView2<Float>,
mut fut: ArrayViewMut2<Float>,
) {
assert_eq!(prev.shape(), fut.shape());
let nx = prev.shape()[1];
for (prev, mut fut) in prev.outer_iter().zip(fut.outer_iter_mut()) {
let prev = &prev.as_slice().unwrap()[..nx];
let fut = &mut fut.as_slice_mut().unwrap()[..nx];
diff_op_1d_slice(matrix, optype, prev, fut)
}
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}
#[inline(always)]
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/// Dispatch based on strides
pub(crate) fn diff_op_2d<const M: usize, const N: usize, const D: usize>(
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matrix: &BlockMatrix<Float, M, N, D>,
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optype: OperatorType,
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prev: ArrayView2<Float>,
fut: ArrayViewMut2<Float>,
) {
assert_eq!(prev.shape(), fut.shape());
match (prev.strides(), fut.strides()) {
([_, 1], [_, 1]) => diff_op_2d_sliceable(matrix, optype, prev, fut),
_ => diff_op_2d_fallback(matrix, optype, prev, fut),
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}
}
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/*
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#[inline(always)]
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/// Way to too much overhead with SIMD:
/// output SIMD oriented:
/// |S | = |P0 P1| |P0 P1|
/// |S | = a1|P0 P1| + b1|P0 P1|
/// |S | = |P0 P1| |P0 P1|
///
/// | S | = |P0 P1| |P0 P1|
/// | S | = a2|P0 P1| + b1|P0 P1|
/// | S | = |P0 P1| |P0 P1|
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pub(crate) fn diff_op_col_matrix<const M: usize, const N: usize, const D: usize>(
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matrix: &BlockMatrix<M, N, D>,
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optype: OperatorType,
prev: ArrayView2<Float>,
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fut: ArrayViewMut2<Float>,
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) {
assert_eq!(prev.shape(), fut.shape());
let nx = prev.shape()[1];
assert!(nx >= 2 * M);
assert_eq!(prev.strides()[0], 1);
assert_eq!(fut.strides()[0], 1);
let dx = if optype == OperatorType::H2 {
1.0 / (nx - 2) as Float
} else {
1.0 / (nx - 1) as Float
};
let idx = 1.0 / dx;
#[cfg(not(feature = "f32"))]
type SimdT = packed_simd::f64x8;
#[cfg(feature = "f32")]
type SimdT = packed_simd::f32x16;
let ny = prev.shape()[0];
// How many elements that can be simdified
let simdified = SimdT::lanes() * (ny / SimdT::lanes());
let half_diag_width = (D - 1) / 2;
assert!(half_diag_width <= M);
let fut_stride = fut.strides()[1];
let prev_base_ptr = prev.as_ptr();
let prev_stride = prev.strides()[1];
let prev_ptr = |j, i| {
debug_assert!(j < ny && i < nx);
unsafe { prev_base_ptr.offset(prev_stride * i as isize + j as isize) }
};
// Not algo necessary, but gives performance increase
assert_eq!(fut_stride, prev_stride);
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use ndarray::Axis;
let (mut fut1, fut) = fut.split_at(Axis(1), M);
let (mut fut, mut fut2) = fut.split_at(Axis(1), nx - 2 * M);
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// First block
{
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let prev = prev.slice(ndarray::s![.., ..N]);
let (prevb, prevl) = prev.split_at(Axis(0), simdified);
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for (mut fut, &bl) in fut1.axis_iter_mut(Axis(1)).zip(matrix.start.iter_rows()) {
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let fut = fut.as_slice_mut().unwrap();
let fut = &mut fut[..ny];
let mut fut = fut.chunks_exact_mut(SimdT::lanes());
let mut prev = prevb.axis_chunks_iter(Axis(0), SimdT::lanes());
for (fut, prev) in fut.by_ref().zip(prev.by_ref()) {
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let mut f = SimdT::splat(0.0);
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for (&bl, prev) in bl.iter().zip(prev.axis_iter(Axis(1))) {
let prev = prev.to_slice().unwrap();
let prev = SimdT::from_slice_unaligned(prev);
f = prev.mul_adde(SimdT::splat(bl), f);
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}
f *= idx;
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f.write_to_slice_unaligned(fut);
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}
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for (fut, prev) in fut
.into_remainder()
.iter_mut()
.zip(prevl.axis_iter(Axis(0)))
{
let mut f = 0.0;
for (bl, prev) in bl.iter().zip(prev.iter()) {
f += bl * prev;
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}
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*fut = f * idx;
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}
}
}
// Diagonal elements
{
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let window_elems_to_skip = M - ((D - 1) / 2);
let prev = prev.slice(ndarray::s![.., window_elems_to_skip..]);
let prev = prev.windows((ny, D));
for (mut fut, prev) in fut.axis_iter_mut(Axis(1)).zip(prev) {
let fut = fut.as_slice_mut().unwrap();
let fut = &mut fut[..ny];
let mut fut = fut.chunks_exact_mut(SimdT::lanes());
let (prevb, prevl) = prev.split_at(Axis(0), simdified);
let prev = prevb.axis_chunks_iter(Axis(0), SimdT::lanes());
for (fut, prev) in fut.by_ref().zip(prev) {
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let mut f = SimdT::splat(0.0);
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for (&d, prev) in matrix.diag.iter().zip(prev.axis_iter(Axis(1))) {
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let prev = prev.to_slice().unwrap();
let prev = SimdT::from_slice_unaligned(prev);
f = prev.mul_adde(SimdT::splat(d), f);
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}
f *= idx;
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f.write_to_slice_unaligned(fut);
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}
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for (fut, prev) in fut
.into_remainder()
.into_iter()
.zip(prevl.axis_iter(Axis(0)))
{
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let mut f = 0.0;
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for (&d, prev) in matrix.diag.iter().zip(prev) {
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f += d * prev;
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}
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*fut = idx * f;
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}
}
}
// End block
{
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for (mut fut, &bl) in fut2.axis_iter_mut(Axis(1)).zip(matrix.end.iter_rows()) {
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let fut = fut.as_slice_mut().unwrap();
let fut = &mut fut[..ny];
let mut fut = fut.chunks_exact_mut(SimdT::lanes());
for (fut, j) in fut.by_ref().zip((0..simdified).step_by(SimdT::lanes())) {
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let index_to_simd = |i| unsafe {
// j never moves past end of slice due to step_by and
// rounding down
SimdT::from_slice_unaligned(std::slice::from_raw_parts(
prev_ptr(j, i),
SimdT::lanes(),
))
};
let mut f = SimdT::splat(0.0);
for (iprev, &bl) in (nx - N..nx).zip(bl.iter()) {
f = index_to_simd(iprev).mul_adde(SimdT::splat(bl), f);
}
f *= idx;
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f.write_to_slice_unaligned(fut);
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}
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for (fut, j) in fut.into_remainder().into_iter().zip(simdified..ny) {
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unsafe {
let mut f = 0.0;
for (iprev, bl) in (nx - N..nx).zip(bl.iter()) {
f += bl * *prev_ptr(j, iprev);
}
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*fut = f * idx;
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}
}
}
}
}
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*/
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#[inline(always)]
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fn dotproduct<'a>(
u: impl IntoIterator<Item = &'a Float>,
v: impl IntoIterator<Item = &'a Float>,
) -> Float {
u.into_iter().zip(v.into_iter()).fold(0.0, |acc, (&u, &v)| {
#[cfg(feature = "fast-float")]
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{
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// We do not care about the order of multiplication nor addition
(FastFloat::from(acc) + FastFloat::from(u) * FastFloat::from(v)).into()
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}
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#[cfg(not(feature = "fast-float"))]
{
acc + u * v
}
})
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}
#[cfg(feature = "sparse")]
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pub(crate) fn sparse_from_block<const M: usize, const N: usize, const D: usize>(
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matrix: &BlockMatrix<Float, M, N, D>,
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optype: OperatorType,
n: usize,
) -> sprs::CsMat<Float> {
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assert!(n >= 2 * M);
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let nnz = {
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let blockstart_elems = matrix
.start
.iter()
.fold(0, |acc, &x| if x != 0.0 { acc + 1 } else { acc });
let diag_elems = matrix
.diag
.iter()
.fold(0, |acc, &x| if x != 0.0 { acc + 1 } else { acc });
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let blockend_elems = matrix
.end
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.iter()
.fold(0, |acc, &x| if x != 0.0 { acc + 1 } else { acc });
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blockstart_elems + (n - 2 * M) * diag_elems + blockend_elems
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};
let mut mat = sprs::TriMat::with_capacity((n, n), nnz);
let dx = if optype == OperatorType::H2 {
1.0 / (n - 2) as Float
} else {
1.0 / (n - 1) as Float
};
let idx = 1.0 / dx;
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for (j, bl) in matrix.start.iter_rows().enumerate() {
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for (i, &b) in bl.iter().enumerate() {
if b == 0.0 {
continue;
}
mat.add_triplet(j, i, b * idx);
}
}
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for j in M..n - M {
let half_diag_len = D / 2;
for (&d, i) in matrix.diag.iter().zip(j - half_diag_len..) {
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if d == 0.0 {
continue;
}
mat.add_triplet(j, i, d * idx);
}
}
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for (bl, j) in matrix.end.iter_rows().zip(n - M..) {
for (&b, i) in bl.iter().zip(n - N..) {
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if b == 0.0 {
continue;
}
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mat.add_triplet(j, i, b * idx);
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}
}
mat.to_csr()
}
#[cfg(feature = "sparse")]
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pub(crate) fn h_matrix<const D: usize>(
hmatrix: &DiagonalMatrix<D>,
n: usize,
is_h2: bool,
) -> sprs::CsMat<Float> {
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let h = if is_h2 {
1.0 / (n - 2) as Float
} else {
1.0 / (n - 1) as Float
};
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let nmiddle = n - 2 * D;
let iter = hmatrix
.start
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.iter()
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.chain(std::iter::repeat(&hmatrix.diag).take(nmiddle))
.chain(hmatrix.end.iter())
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.map(|&x| h * x);
let mut mat = sprs::TriMat::with_capacity((n, n), n);
for (i, d) in iter.enumerate() {
mat.add_triplet(i, i, d);
}
mat.to_csr()
}